carputils.forcepss.prepace Namespace Reference

Functions
def	mesh_base_format (meshname)
def	setup_lats_prepacing (pp_bcl, pp_cycs, lat_file)
def	stim_mode (prop)
def	setup_prepace (meshname, cnf, fncs, elecs, pp_prtcl, rmode, *use_split=True, split_file=None, tags_file=None, job=None, ucc_file=None)
def	sim_ID (prefix, pp_prtcl, caseID)
def	generate_lat (meshname, configs, funcs, elecs, solver, pp_prtcl, gen_lat, lats_file, visual, use_split=True, split_file=None, tags_file=None, job=None, ucc_file=None)
def	setup_tsavs (tsav, tsav_basename)
def	prepace (meshname, cnf, fncs, elecs, pp_prtcl, mode, lats_file, rmode, visual, use_split=True, split_file=None, tags_file=None, job=None, ucc_file=None)
def	restart (meshname, cnf, fncs, elecs, pp_prtcl, mode, rmode, restart_chkpt, visual, job=None, ucc_file=None)
def	print_prepace_summary (pprtcl, plan, prepace, lat, rstrt_file)

Variables
string	EXAMPLE_DESCRIPTIVE_NAME = 'Prepacing and validation of tissue/organ models'
string	EXAMPLE_AUTHOR = 'Gernot Plank <gernot.plank@medunigraz.at>, ' \
	EXAMPLE_DIR = os.path.dirname(__file__)

Function Documentation

generate_lat()

def carputils.forcepss.prepace.generate_lat	(		meshname,
			configs,
			funcs,
			elecs,
			solver,
			pp_prtcl,
			gen_lat,
			lats_file,
			visual,
			use_split = True,
			split_file = None,
			tags_file = None,
			job = None,
			ucc_file = None
	)

mesh_base_format()

def carputils.forcepss.prepace.mesh_base_format

(

meshname

)

prepace()

def carputils.forcepss.prepace.prepace	(		meshname,
			cnf,
			fncs,
			elecs,
			pp_prtcl,
			mode,
			lats_file,
			rmode,
			visual,
			use_split = True,
			split_file = None,
			tags_file = None,
			job = None,
			ucc_file = None
	)

print_prepace_summary()

def carputils.forcepss.prepace.print_prepace_summary	(		pprtcl,
			plan,
			prepace,
			lat,
			rstrt_file
	)

restart()

def carputils.forcepss.prepace.restart	(		meshname,
			cnf,
			fncs,
			elecs,
			pp_prtcl,
			mode,
			rmode,
			restart_chkpt,
			visual,
			job = None,
			ucc_file = None
	)

setup_lats_prepacing()

def carputils.forcepss.prepace.setup_lats_prepacing	(		pp_bcl,
			pp_cycs,
			lat_file
	)

setup_prepace()

def carputils.forcepss.prepace.setup_prepace	(		meshname,
			cnf,
			fncs,
			elecs,
			pp_prtcl,
			rmode,
		*	use_split = True,
			split_file = None,
			tags_file = None,
			job = None,
			ucc_file = None
	)

setup_tsavs()

def carputils.forcepss.prepace.setup_tsavs	(		tsav,
			tsav_basename
	)

sim_ID()

def carputils.forcepss.prepace.sim_ID	(		prefix,
			pp_prtcl,
			caseID
	)

stim_mode()

def carputils.forcepss.prepace.stim_mode

(

prop

)

Variable Documentation

EXAMPLE_AUTHOR

string carputils.forcepss.prepace.EXAMPLE_AUTHOR = 'Gernot Plank <gernot.plank@medunigraz.at>, ' \

EXAMPLE_DESCRIPTIVE_NAME

string carputils.forcepss.prepace.EXAMPLE_DESCRIPTIVE_NAME = 'Prepacing and validation of tissue/organ models'

EXAMPLE_DIR

carputils.forcepss.prepace.EXAMPLE_DIR = os.path.dirname(__file__)