carputils.machines.medtronic Namespace Reference

Classes
class	Medtronic
	Run jobs on the Medtronic HPC. More...

Variables
string	TEMPLATE

Variable Documentation

TEMPLATE

string carputils.machines.medtronic.TEMPLATE

Initial value:

=  """#!/bin/bash --login
#$ -N Job_{jobID:.15s}
#$ -pe pe_20 {nproc}
#$ -l h_rt={walltime}
#$ -q {queue}

# Change to the directory that the job was submitted from
# (remember this should be on the /work filesystem)
cd $SGE_O_WORKDIR

# Set the number of threads to 1
#   This prevents any system libraries from automatically
#   using threading.
#export OMP_NUM_THREADS=1

module load carp/mdt-1.0
"""