carputils
Doxygen code documentation for the python framework controlling openCARP
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carputils.model.ionic.BondarenkoIonicModel Class Reference

Describes the Bondarenko ionic model. More...

Inheritance diagram for carputils.model.ionic.BondarenkoIonicModel:

Static Public Attributes

string SHORTNAME = 'bondarenko'
 
string MODELID = 'Bondarenko'
 
dictionary PARAMETERS
 

Detailed Description

Describes the Bondarenko ionic model.

Parameters

IDs list of int The material tags to be included in this IMP region name str The name of the model material region a float, optional Value of a, defaults to 0.0625 Acap float, optional Value of Acap, defaults to 0.00013866 aKss_init float, optional Value of aKss_init, defaults to 0.287585636847048 ato_f_init float, optional Value of ato_f_init, defaults to 0.0142335908879204 ato_s_init float, optional Value of ato_s_init, defaults to 0.0443263407760382 aur_init float, optional Value of aur_init, defaults to 0.00346258606821817 b float, optional Value of b, defaults to 0.4 Beta_Na4 float, optional Value of Beta_Na4 Beta_Na5 float, optional Value of Beta_Na5 Bmax float, optional Value of Bmax, defaults to 109.0 C_K1_init float, optional Value of C_K1_init, defaults to 0.0011733433957123 C_K2_init float, optional Value of C_K2_init, defaults to 0.00105586824723736 C_Na1_init float, optional Value of C_Na1_init, defaults to 0.000420472760277688 C_Na2_init float, optional Value of C_Na2_init, defaults to 0.0240114508843199 Cai_init float, optional Value of Cai_init, defaults to 0.0949915068139801 CaJSR_init float, optional Value of CaJSR_init, defaults to 171.167969039613 CaMKt_init float, optional Value of CaMKt_init, defaults to 0.729027738385079 CaNSR_init float, optional Value of CaNSR_init, defaults to 404.825013216286 Cao float, optional Value of Cao, defaults to 1400.0 Cass_init float, optional Value of Cass_init, defaults to 0.0954184301907784 Cm float, optional Value of Cm, defaults to 1.0 const5 float, optional Value of const5, defaults to 8.2 CSQN_tot float, optional Value of CSQN_tot, defaults to 50000.0 delta_V_L float, optional Value of delta_V_L, defaults to 6.4489 E_Cl float, optional Value of E_Cl, defaults to -40.0 eta float, optional Value of eta, defaults to 0.35 F float, optional Value of F, defaults to 96.5 GbCa float, optional Value of GbCa, defaults to 0.0007 GClCa float, optional Value of GClCa, defaults to 10.0 GK1 float, optional Value of GK1, defaults to 0.35 GKr float, optional Value of GKr, defaults to 0.0165 GKs float, optional Value of GKs, defaults to 0.00575 GKss float, optional Value of GKss, defaults to 0.0595 GKto_f float, optional Value of GKto_f, defaults to 0.5347 GKto_s float, optional Value of GKto_s, defaults to 0.0 GKur float, optional Value of GKur, defaults to 0.25 GNa float, optional Value of GNa, defaults to 16.0 GNab float, optional Value of GNab, defaults to 0.0026 I1_Na_init float, optional Value of I1_Na_init, defaults to 0.000517471697712382 I2_Na_init float, optional Value of I2_Na_init, defaults to 2.45406116958509e-05 I_init float, optional Value of I_init, defaults to 0.427651445872853 I_K_init float, optional Value of I_K_init, defaults to 0.00140618453684944 IC_Na2_init float, optional Value of IC_Na2_init, defaults to 0.0174528857380179 IC_Na3_init float, optional Value of IC_Na3_init, defaults to 0.402980726914811 ICaLmax float, optional Value of ICaLmax, defaults to 7.0 IF_Na_init float, optional Value of IF_Na_init, defaults to 0.000306123648969581 IpCa_max float, optional Value of IpCa_max, defaults to 0.0955 ito_f_init float, optional Value of ito_f_init, defaults to 0.996989882138174 ito_s_init float, optional Value of ito_s_init, defaults to 0.887568880831388 iur_init float, optional Value of iur_init, defaults to 0.955684946168062 K_L float, optional Value of K_L, defaults to 0.3 K_mAllo float, optional Value of K_mAllo, defaults to 0.0 K_mCai float, optional Value of K_mCai, defaults to 3.6 K_mCao float, optional Value of K_mCao, defaults to 1400.0 k_minus_a float, optional Value of k_minus_a, defaults to 0.07125 k_minus_b float, optional Value of k_minus_b, defaults to 0.965 k_minus_c float, optional Value of k_minus_c, defaults to 0.0008 K_mNai float, optional Value of K_mNai, defaults to 12000.0 K_mNao float, optional Value of K_mNao, defaults to 88000.0 k_plus_a float, optional Value of k_plus_a, defaults to 0.006075 k_plus_b float, optional Value of k_plus_b, defaults to 0.00405 k_plus_c float, optional Value of k_plus_c, defaults to 0.009 k_sat float, optional Value of k_sat, defaults to 0.27 kb float, optional Value of kb, defaults to 0.036778 Kd float, optional Value of Kd, defaults to 0.6 kf float, optional Value of kf, defaults to 0.023761 Ki_init float, optional Value of Ki_init, defaults to 115599.50642567 Km_Cl float, optional Value of Km_Cl, defaults to 10.0 Km_CSQN float, optional Value of Km_CSQN, defaults to 630.0 Km_Ko float, optional Value of Km_Ko, defaults to 1500.0 Km_Nai float, optional Value of Km_Nai, defaults to 16600.0 Km_pCa float, optional Value of Km_pCa, defaults to 0.2885 Km_up float, optional Value of Km_up, defaults to 0.412 Ko float, optional Value of Ko, defaults to 5400.0 m float, optional Value of m, defaults to 3.0 maxINaK float, optional Value of maxINaK, defaults to 2.486 n float, optional Value of n, defaults to 4.0 Nai_init float, optional Value of Nai_init, defaults to 12364.7482121793 Nao float, optional Value of Nao, defaults to 134000.0 nKs_init float, optional Value of nKs_init, defaults to 0.00336735013094628 O_init float, optional Value of O_init, defaults to 1.23713515513533e-06 O_K_init float, optional Value of O_K_init, defaults to 0.0131742086125972 O_Na_init float, optional Value of O_Na_init, defaults to 1.46826771436314e-06 off_rate float, optional Value of off_rate, defaults to 0.0002 on_rate float, optional Value of on_rate, defaults to 0.05 P_C2_init float, optional Value of P_C2_init, defaults to 0.565182571165673 P_CaL float, optional Value of P_CaL, defaults to 2.5 P_O1_init float, optional Value of P_O1_init, defaults to 0.00571393383393735 P_O2_init float, optional Value of P_O2_init, defaults to 2.09864618235341e-08 P_ryr_const1 float, optional Value of P_ryr_const1, defaults to -0.01 P_ryr_const2 float, optional Value of P_ryr_const2, defaults to -2.0 P_RyR_init float, optional Value of P_RyR_init, defaults to 0.000280539508743811 phi_L float, optional Value of phi_L, defaults to 1.798 R float, optional Value of R, defaults to 8.314 T float, optional Value of T, defaults to 308.0 t_L float, optional Value of t_L, defaults to 1.5 tau_i_const float, optional Value of tau_i_const, defaults to 643.0 tau_L float, optional Value of tau_L, defaults to 1150.0 tau_tr float, optional Value of tau_tr, defaults to 20.0 tau_xfer float, optional Value of tau_xfer, defaults to 8.0 v1 float, optional Value of v1, defaults to 4.5 v1_caff float, optional Value of v1_caff, defaults to 10.0 v2 float, optional Value of v2, defaults to 3e-05 v2_caff float, optional Value of v2_caff, defaults to 0.1 V_init float, optional Value of V_init, defaults to -78.9452115785979 V_L float, optional Value of V_L, defaults to 0.0 V_max_NCX float, optional Value of V_max_NCX, defaults to 3.939 VJSR float, optional Value of VJSR, defaults to 7.7e-08 vmup_init float, optional Value of vmup_init, defaults to 0.5059 Vmyo float, optional Value of Vmyo, defaults to 2.2e-05 VNSR float, optional Value of VNSR, defaults to 2.31e-07 Vss float, optional Value of Vss, defaults to 2.2e-08 y_gate_init float, optional Value of y_gate_init, defaults to 0.845044436980163 y_gate_tau_const1 float, optional Value of y_gate_tau_const1, defaults to 8.0 y_gate_tau_const2 float, optional Value of y_gate_tau_const2, defaults to 315.0

Member Data Documentation

◆ MODELID

string carputils.model.ionic.BondarenkoIonicModel.MODELID = 'Bondarenko'
static

◆ PARAMETERS

dictionary carputils.model.ionic.BondarenkoIonicModel.PARAMETERS
static

◆ SHORTNAME

string carputils.model.ionic.BondarenkoIonicModel.SHORTNAME = 'bondarenko'
static

The documentation for this class was generated from the following file: