bin.insert_endo_layer Namespace Reference

TBD. More...

Classes
class	TagHandler
	simple class to handle element-tag data More...

Functions
def	argument_parser ()
def	jobID (args)
def	check_cutoff_regions (rv_apba_min_max, lv_apba_min_max)
	Check the rho and apba bounds of the input arguments for the LV and the RV. More...
def	check_binary_mesh (job, meshname)
def	run (args, job)
def	get_tag_split (meshname)
def	check_mesh (job, meshname)
def	extract_endo_surfaces (job, mesh_name, endo_surf_filename)
def	load_tags (meshname, tags_list=None)
def	generate (job, mesh_name, output_dir, rv_tag, lv_tag, rv_apba_min_max=[0, 1.0], lv_apba_min_max=[0, 1.0], visualize=False, dry=False)
def	restrict_ucc_vtx_data (bounds, ucc_data, filename, vtx_data)
	Restrict vtx_data list according to bounds in certain ucc_data. More...
def	generate_tagging_files (job, mesh_name, regions, output_dir)
	Generate the tagging files for the mesh from provided regions. More...

Detailed Description

TBD.

Function Documentation

argument_parser()

def bin.insert_endo_layer.argument_parser

(

)

check_binary_mesh()

def bin.insert_endo_layer.check_binary_mesh	(		job,
			meshname
	)

check_cutoff_regions()

def bin.insert_endo_layer.check_cutoff_regions	(		rv_apba_min_max,
			lv_apba_min_max
	)

Check the rho and apba bounds of the input arguments for the LV and the RV.

@par Parameters

args str Carputils argument parser consisting of bound args.

check_mesh()

def bin.insert_endo_layer.check_mesh	(		job,
			meshname
	)

extract_endo_surfaces()

def bin.insert_endo_layer.extract_endo_surfaces	(		job,
			mesh_name,
			endo_surf_filename
	)

generate()

def bin.insert_endo_layer.generate	(		job,
			mesh_name,
			output_dir,
			rv_tag,
			lv_tag,
			rv_apba_min_max = [0, 1.0],
			lv_apba_min_max = [0, 1.0],
			visualize = False,
			dry = False
	)

generate_tagging_files()

def bin.insert_endo_layer.generate_tagging_files	(		job,
			mesh_name,
			regions,
			output_dir
	)

Generate the tagging files for the mesh from provided regions.

@par Parameters

job carputils.job Job operator from carputils. mesh_name str Full file pathname to the mesh regions data array List of regions to be tagged within the Mesh. Each region has 3 entries: [label, vtx_filename, tag] output_dir str Specify the directory where the files are written.

@return

Writes restricted vertex data to filenmae +'.vtx'

get_tag_split()

def bin.insert_endo_layer.get_tag_split

(

meshname

)

jobID()

def bin.insert_endo_layer.jobID

(

args

)

load_tags()

def bin.insert_endo_layer.load_tags	(		meshname,
			tags_list = None
	)

restrict_ucc_vtx_data()

def bin.insert_endo_layer.restrict_ucc_vtx_data	(		bounds,
			ucc_data,
			filename,
			vtx_data
	)

Restrict vtx_data list according to bounds in certain ucc_data.

@par Parameters

bounds 2-element array Bounds of the ucc coordinate data. For example, [0,0.3] ucc_data data array (N,1) Single coordinate data array. Vtx data must correspond to this ucc_data array. filename str Output filename returned with ending '.vtx' vtx_data data array (M,1) s.t. M in N array of indices to perform the bounding on.

@return

Writes restricted vertex data to filenmae +'.vtx'

run()

def bin.insert_endo_layer.run	(		args,
			job
	)