Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 123]

►Nhashmap
Chash_ops	Base hashing class
Chash_int_ops
Chash_ops< int32_t >
Chash_ops< int64_t >
Chash_ops< std::string >
Chash_ops< std::pair< P, Q > >
Chash_ops< std::tuple< T... > >
Chash_ops< std::vector< T > >
Chash_cstr_ops
Chash_ptr_ops
Chash_obj_ops
►Cunordered_map
Cconst_iterator	Const iterator
Citerator	Default iterator
Cidict
►Cunordered_set	Custom unordered_set implementation
Cconst_iterator
Centry_t	Internal entry type
Citerator
Cmfp
Chash_ops< SF::tuple< T > >
Chash_ops< SF::triple< T > >
Chash_ops< SF::quadruple< T > >
►Nkdpart
Cvec3	Minimalistic internal point struct
Cbbox	Bounding box struct
Celem	Element definition
Cpartition	Struct holding all partition data
Cmixed_pair	Combined floating point and integer pair
Cparallel_partitioner
Csequential_partitioner
►Nlimpet
Cevent_x_threshold
Cevent_mx_rate
Cevent_mx_val
C_event_class
Cap_event
Cap_events
Csteady_state_ap
Caction_potential
CIOCtrl
CGVEC_DUMP
Cevent_timing
CClamp
Ctc_grp	Time constant groups
Cts	Time stepper
CSV_TAB	Array of stat variable structures
Ccell_geom
CIMPinfo
CIonIfBase	Represents the ionic model and plug-in (IMP) data structure
►CIonIf	Child class of IonIfBase specialized for each ionic model type
CLimpetArray	Utility class for handling arrays of data used by IMPs
CIonType	Abstract class representing an ionic model type
CLimpetData
CLUT	Lookup table structure
CSV_DUMP	Data structure to manage state variable file dumps
CTrace_Info	Data structure to manage trace dumps. Should eventually be combined with the state variable dumps, but I'm keeping it separate for now for my own sanity
CMULTI_IF
Cd_OdeVec
CTrgList
Crestitute_S1S2
Crestitute_dynamic
Crestitution
CpulseStretch
CisoStretch
CisoSarcoStretch
CauxotonicStretch
C_stretch
CTargetAllocator	Allocator structure for dynamically allocating memory on multiple targets
Ctrace	Manage input, output, resampling of traces
►Nopencarp
►Nasync
Cintercomm_layout	Minimal information needed for communication between MPI_Comms
Casync_IO_queue	Queue with the data required for performing async IO writes to IGB
►Nsig
Ctime_trace_ffmt	Manage trace format
Ctime_trace	Time tracing class
CPulse
CAPfoot
CStep
CsineWave
CsampleTraceFunc
CconstFunc	Constant function
CstepFunc	Step function
CsineFunc	Sine waves
CAPfootFunc	Action potential foot pulse
CmonophasicTruncExpFunc	Monophasic truncated exponentials (capacitive discharge)
CbiphasicTruncExpFunc	Biphasic truncated exponentials (capacitive discharge)
Cprog_stats	For display execution progress and statistical data of electrical solve
Csync_io_item
Casync_io_item
Cigb_output_manager
CphysMaterial
CelecMaterial
CdiffMaterial
CopticsMaterial
CRegionSpecs	Region based variations of arbitrary material parameters
CMaterialType	Description of materal properties in a mesh
Celec_stiffness_integrator
Cmass_integrator
Celliptic_solver
Cparabolic_solver
CActivation	Event detection data structures
CSentinel	Sentinel for checking activity in the tissue
CLAT_detector
Cphie_recovery_data
CElectrics
CLaplace
Cnode_stats	Struct used for debugging purposes
►Ceikonal_solver
Cdiffusion_current
CEikonal
CIonics
Csv_data
Cgvec_data
CBasic_physic	The abstract physics interface we can use to trigger all physics
Cstim_pulse	Define the wave form of a stimulation pulse
Cstim_protocol
Cstim_physics
Cstim_electrode
Cstimulus
►Cdbc_manager	Manager for dirichlet boundary conditions
Cdbc_data
CSalt_list	Saltatory list – memory is allocated in chunks
Cfile_desc	File descriptor struct
Cgeom_shape	Class to store shape definitions
CList
CS_Complex
CD_Complex
Crgba
CIGBheader
Cbase_timer
Ctimer_manager	Centralize time managment and output triggering
Ctimer_eq
Ctimer_neq
Clin_solver_stats	For analysis of the #iterations to solve CG
Ceikonal_solver_stats	For analysis of the computations done to solve the eikonal model
Cgeneric_timing_stats	For analysis of the #iterations to solve CG
Cvec3
►NSF
Cdmat	Dense matrix class
Cabstract_linear_solver
Cabstract_matrix
Cabstract_vector
Cscattering	Container for a PETSc VecScatter
Cscatter_registry	The scatterer registry class
CPoint	Point and vector struct
Coverlapping_layout	The overlapping_layout class contains the algorithms related to managing overlapping parallel index sets, such as the indexing of the nodes, faces or edges of a distributed mesh
Cnon_overlapping_layout	The parallel layout of non overlapping indices
Cindex_mapping	Index mapping class. This is a bijective mapping
Cmeshdata	The mesh storage class. It contains both element and vertex data
Ccommgraph	The class holds the communication graph for a MPI_Exchange() call
Ctuple
Cmixed_tuple
Ctriple
Cmixed_triple
Cquadruple
Celement_view	Comfort class. Provides getter functions to access the mesh member variables more comfortably
Cmatrix_integrator	Abstract matrix integration base class
Cvector_integrator	Abstract vector integration base class
Csparse_multiply_transpose	Functor for the sparse matrix multiply-transpose operation
Cnumbering	The abstract numbering class
Csubmesh_numbering	Functor class applying a submesh renumbering
Cpetsc_numbering	Functor class generating a numbering optimized for PETSc
Cparallel_layout	The base class for parallel layouts
Cabstract_partitioner	Abstract base class for a mesh partitioner
Ckdtree_partitioner
Cvector	A vector storing arbitrary data
CasciiPlotter
CBBoxDef
CBlockRegion
CBoundingBox
CButterworth
CCylindricalRegion
CD_Complex
CElement
CfibDef
CFILE_PTR
CGrid
CGrid1D
CGrid2D
CGrid3D
CHexahedron
Chistogramm_plotter	Class that generates a histogram for a data vector and prints it using asciiPlotter
CIGBheader
CIIR_Filt
CInterp	Interpolate class
CLine
CList
Cmatrixgraph_plotter	Ascii matrix graph plotter
CpiecewiseLinear_function
Cprogress	Base class for tracking progress
Cprogress_bar	Display progress as a bar
Cprogress_percent	Display progress as a percentage
Cquad_sele
CQuadrilateral
CRegion
Crgba
CS_Complex
CSphericalRegion
CTestGinkgo
CTetrahedron
CTisAxes
CtmProfile
Ctri_sele
CTriangle