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by (120 points)
When playing around with the tutorials (specifically the ECG one) after having installed all dependencies using Homebrew (in opt/homebrew), I noticed that simply copying the commands as per the tutorial into my terminal returned errors saying that the dependencies were not found in the expected directory (opt/local). I think I got the simulation to work after modifying some paths manually. But it didn't work for Meshalyzer. I also noticed that the directories /opt/local appear explicitly in run.py in tutorials/02_EP_tissue/07_extracellular.

Will there be a problem when running my own simulations instead of the tutorials? At some point I want to work with a custom EP model.

Thanks in advance!

1 Answer

0 votes
by (3.4k points)

Hello James,

Could you tell exactly where you find this reference to /opt/local in the file run.py?
I couldn't find it by searching the file.

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