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Publications using openCARP

1. Firstauthor, I., and Secondauthor, U., Who will publish the first openCARP-based paper? openCARP Journal 2019;1:0–0.

Publications using CARP

1. Niestrawska, J. A., Augustin, C. M., and Plank, G., Computational modeling of cardiac growth and remodeling in pressure overloaded hearts – linking microstructure to organ phenotype. Acta Biomaterialia 2020; doi:10.1016/j.actbio.2020.02.010.

2. Strocchi, M., Gsell, M. A., Augustin, C. M., Razeghi, O., Roney, C. H., Prassl, A. J., Vigmond, E. J., Behar, J. M., Gould, J. S., Rinaldi, C. A., Bishop, M. J., Plank, G., and Niederer, S. A., Simulating ventricular systolic motion in a four-chamber heart model with spatially varying robin boundary conditions to model the effect of the pericardium. Journal of Biomechanics 2020;109645. doi:10.1016/j.jbiomech.2020.109645.

3. Augustin, C. M., Fastl, T. E., Neic, A., Bellini, C., Whitaker, J., Rajani, R., O’Neill, M. D., Bishop, M. J., Plank, G., and Niederer, S. A., The impact of wall thickness and curvature on wall stress in patient-specific electromechanical models of the left atrium. Biomechanics and Modeling in Mechanobiology 2019; doi:10.1007/s10237-019-01268-5.

4. Campos, F. O., Whitaker, J., Neji, R., Roujol, S., O’Neill, M., Plank, G., and Bishop, M. J., Factors promoting conduction slowing as substrates for block and reentry in infarcted hearts. Biophysical Journal 2019;117:2361–2374. doi:10.1016/j.bpj.2019.08.008.

5. Lee, A. W., ORegan, D. P., Gould, J., Sidhu, B., Sieniewicz, B., Plank, G., Warriner, D. R., Lamata, P., Rinaldi, C. A., and Niederer, S. A., Sex-dependent QRS guidelines for cardiac resynchronization therapy using computer model predictions. Biophysical Journal 2019;117:2375–2381. doi:10.1016/j.bpj.2019.08.025.

6. Balaban, G., Halliday, B. P., Bai, W., Porter, B., Malvuccio, C., Lamata, P., Rinaldi, C. A., Plank, G., Rueckert, D., Prasad, S. K., and Bishop, M. J., Scar shape analysis and simulated electrical instabilities in a non-ischemic dilated cardiomyopathy patient cohort. PLOS Computational Biology 2019;15:e1007421. doi:10.1371/journal.pcbi.1007421.

7. Costa, C. M., Neic, A., Kerfoot, E., Porter, B., Sieniewicz, B., Gould, J., Sidhu, B., Chen, Z., Plank, G., Rinaldi, C. A., Bishop, M. J., and Niederer, S. A., Pacing in proximity to scar during cardiac resynchronization therapy increases local dispersion of repolarization and susceptibility to ventricular arrhythmogenesis. Heart Rhythm 2019;16:1475–1483. doi:10.1016/j.hrthm.2019.03.027.

8. Karabelas, E., Haase, G., Plank, G., and Augustin, C. M., Versatile stabilized finite element formulations for nearly and fully incompressible solid mechanics. Computational Mechanics 2019;65:193–215. doi:10.1007/s00466-019-01760-w.

9. Plancke, A.-M., Connolly, A., Gemmell, P. M., Neic, A., McSpadden, L. C., Whitaker, J., ONeill, M., Rinaldi, C. A., Rajani, R., Niederer, S. A., Plank, G., and Bishop, M. J., Generation of a cohort of whole-torso cardiac models for assessing the utility of a novel computed shock vector efficiency metric for ICD optimisation. Computers in Biology and Medicine 2019;112:103368. doi:10.1016/j.compbiomed.2019.103368.

10. Kunisch, K., Neic, A., Plank, G., and Trautmann, P., Inverse localization of earliest cardiac activation sites from activation maps based on the viscous eikonal equation. Journal of Mathematical Biology 2019;79:2033–2068. doi:10.1007/s00285-019-01419-3.

11. Willemen, E., Schreurs, R., Huntjens, P. R., Strik, M., Plank, G., Vigmond, E., Walmsley, J., Vernooy, K., Delhaas, T., Prinzen, F. W., and Lumens, J., The left and right ventricles respond differently to variation of pacing delays in cardiac resynchronization therapy: A combined experimental- computational approach. Frontiers in Physiology 2019;10: doi:10.3389/fphys.2019.00017.

12. Balaban, G., Halliday, B. P., Costa, C. M., Bai, W., Porter, B., Rinaldi, C. A., Plank, G., Rueckert, D., Prasad, S. K., and Bishop, M. J., Fibrosis microstructure modulates reentry in non-ischemic dilated cardiomyopathy: Insights from imaged guided 2D computational modeling. Frontiers in Physiology 2018;9: doi:10.3389/fphys.2018.01832.

13. Gsell, M. A. F., Augustin, C. M., Prassl, A. J., Karabelas, E., Fernandes, J. F., Kelm, M., Goubergrits, L., Kuehne, T., and Plank, G., Assessment of wall stresses and mechanical heart power in the left ventricle: Finite element modeling versus laplace analysis. International Journal for Numerical Methods in Biomedical Engineering 2018;34:e3147. doi:10.1002/cnm.3147.

14. Manninger, M., Zweiker, D., Hunnik, A. van, Alogna, A., Prassl, A. J., Schipke, J., Zeemering, S., Zirngast, B., Schönleitner, P., Schwarzl, M., Herbst, V., Thon-Gutschi, E., Huber, S., Rohrer, U., et al., Arterial hypertension drives arrhythmia progression via specific structural remodeling in a porcine model of atrial fibrillation. Heart Rhythm 2018;15:1328–1336. doi:10.1016/j.hrthm.2018.05.016.

15. Corrado, C., Williams, S., Karim, R., Plank, G., O’Neill, M., and Niederer, S., A work flow to build and validate patient specific left atrium electrophysiology models from catheter measurements. Medical Image Analysis 2018;47:153–163. doi:10.1016/j.media.2018.04.005.

16. Fastl, T. E., Tobon-Gomez, C., Crozier, A., Whitaker, J., Rajani, R., McCarthy, K. P., Sanchez-Quintana, D., Ho, S. Y., O’Neill, M. D., Plank, G., Bishop, M. J., and Niederer, S. A., Personalized computational modeling of left atrial geometry and transmural myofiber architecture. Medical Image Analysis 2018;47:180–190. doi:10.1016/j.media.2018.04.001.

17. Karabelas, E., Gsell, M. A. F., Augustin, C. M., Marx, L., Neic, A., Prassl, A. J., Goubergrits, L., Kuehne, T., and Plank, G., Towards a computational framework for modeling the impact of aortic coarctations upon left ventricular load. Frontiers in Physiology 2018;9: doi:10.3389/fphys.2018.00538.

18. Bayer, J., Prassl, A. J., Pashaei, A., Gomez, J. F., Frontera, A., Neic, A., Plank, G., and Vigmond, E. J., Universal ventricular coordinates: A generic framework for describing position within the heart and transferring data. Medical Image Analysis 2018;45:83–93. doi:10.1016/j.media.2018.01.005.

19. Costa, C. M., Plank, G., Rinaldi, C. A., Niederer, S. A., and Bishop, M. J., Modeling the electrophysiological properties of the infarct border zone. Frontiers in Physiology 2018;9: doi:10.3389/fphys.2018.00356.

20. Neic, A., Campos, F. O., Prassl, A. J., Niederer, S. A., Bishop, M. J., Vigmond, E. J., and Plank, G., Efficient computation of electrograms and ECGs in human whole heart simulations using a reaction-eikonal model. Journal of Computational Physics 2017;346:191–211. doi:10.1016/j.jcp.2017.06.020.

21. Campos, F. O., Shiferaw, Y., Vigmond, E. J., and Plank, G., Stochastic spontaneous calcium release events and sodium channelopathies promote ventricular arrhythmias. Chaos: An Interdisciplinary Journal of Nonlinear Science 2017;27:093910. doi:10.1063/1.4999612.

22. Connolly, A., Robson, M. D., Schneider, J., Burton, R., Plank, G., and Bishop, M. J., Highly trabeculated structure of the human endocardium underlies asymmetrical response to low-energy monophasic shocks. Chaos: An Interdisciplinary Journal of Nonlinear Science 2017;27:093913. doi:10.1063/1.4999609.

23. Lee, A. W. C., Crozier, A., Hyde, E. R., Lamata, P., Truong, M., Sohal, M., Jackson, T., Behar, J. M., Claridge, S., Shetty, A., Sammut, E., Plank, G., Rinaldi, C. A., and Niederer, S., Biophysical modeling to determine the optimization of left ventricular pacing site and AV/VV delays in the acute and chronic phase of cardiac resynchronization therapy. Journal of Cardiovascular Electrophysiology 2017;28:208–215. doi:10.1111/jce.13134.

24. Augustin, C. M., Crozier, A., Neic, A., Prassl, A. J., Karabelas, E., Silva, T. F. da, Fernandes, J. F., Campos, F., Kuehne, T., and Plank, G., Patient-specific modeling of left ventricular electromechanics as a driver for haemodynamic analysis. EP Europace 2016;18:iv121–iv129. doi:10.1093/europace/euw369.

25. Crozier, A., Blazevic, B., Lamata, P., Plank, G., Ginks, M., Duckett, S., Sohal, M., Shetty, A., Rinaldi, C. A., Razavi, R., Niederer, S. A., and Smith, N. P., Analysis of lead placement optimization metrics in cardiac resynchronization therapy with computational modelling. EP Europace 2016;18:iv113–iv120. doi:10.1093/europace/euw366.

26. Hill, Y. R., Child, N., Hanson, B., Wallman, M., Coronel, R., Plank, G., Rinaldi, C. A., Gill, J., Smith, N. P., Taggart, P., and Bishop, M. J., Investigating a novel activation-repolarisation time metric to predict localised vulnerability to reentry using computational modelling. PLOS ONE 2016;11:e0149342. doi:10.1371/journal.pone.0149342.

27. Land, S., Gurev, V., Arens, S., Augustin, C. M., Baron, L., Blake, R., Bradley, C., Castro, S., Crozier, A., Favino, M., Fastl, T. E., Fritz, T., Gao, H., Gizzi, A., et al., Verification of cardiac mechanics software: Benchmark problems and solutions for testing active and passive material behaviour. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences 2015;471:20150641. doi:10.1098/rspa.2015.0641.

28. Hyde, E. R., Behar, J. M., Claridge, S., Jackson, T., Lee, A. W., Remme, E. W., Sohal, M., Plank, G., Razavi, R., Rinaldi, C. A., and Niederer, S. A., Beneficial effect on cardiac resynchronization from left ventricular endocardial pacing is mediated by early access to high conduction velocity tissue. Circulation: Arrhythmia and Electrophysiology 2015;8:1164–1172. doi:10.1161/circep.115.002677.

29. Connolly, A., Trew, M. L., Smaill, B. H., Plank, G., and Bishop, M. J., Local gradients in electrotonic loading modulate the local effective refractory period: Implications for arrhythmogenesis in the infarct border zone. IEEE Transactions on Biomedical Engineering 2015;62:2251–2259. doi:10.1109/tbme.2015.2421296.

30. Crozier, A., Augustin, C. M., Neic, A., Prassl, A. J., Holler, M., Fastl, T. E., Hennemuth, A., Bredies, K., Kuehne, T., Bishop, M. J., Niederer, S. A., and Plank, G., Image-based personalization of cardiac anatomy for coupled electromechanical modeling. Annals of Biomedical Engineering 2015;44:58–70. doi:10.1007/s10439-015-1474-5.

31. Campos, F. O., Shiferaw, Y., Prassl, A. J., Boyle, P. M., Vigmond, E. J., and Plank, G., Stochastic spontaneous calcium release events trigger premature ventricular complexes by overcoming electrotonic load. Cardiovascular Research 2015;107:175–183. doi:10.1093/cvr/cvv149.

32. Bishop, M., Rajani, R., Plank, G., Gaddum, N., Carr-White, G., Wright, M., ONeill, M., and Niederer, S., Three-dimensional atrial wall thickness maps to inform catheter ablation procedures for atrial fibrillation. Europace 2015;18:376–383. doi:10.1093/europace/euv073.

33. Bishop, M. J., Connolly, A., and Plank, G., Structural heterogeneity modulates effective refractory period: A mechanism of focal arrhythmia initiation. PLoS ONE 2014;9:e109754. doi:10.1371/journal.pone.0109754.

34. Walton, R. D., Martinez, M. E., Bishop, M. J., Hocini, M., Haïssaguerre, M., Plank, G., Bernus, O., and Vigmond, E. J., Influence of the purkinje-muscle junction on transmural repolarization heterogeneity. Cardiovascular Research 2014;103:629–640. doi:10.1093/cvr/cvu165.

35. Blauer, J. J., Swenson, D., Higuchi, K., Plank, G., Ranjan, R., Marrouche, N., and MacLeod, R. S., Sensitivity and specificity of substrate mapping: AnIn SilicoFramework for the evaluation of electroanatomical substrate mapping strategies. Journal of Cardiovascular Electrophysiology 2014;25:774–780. doi:10.1111/jce.12444.

36. Costa, C. M., Campos, F. O., Prassl, A. J., Santos, R. W. dos, Sanchez-Quintana, D., Ahammer, H., Hofer, E., and Plank, G., An efficient finite element approach for modeling fibrotic clefts in the heart. IEEE Transactions on Biomedical Engineering 2014;61:900–910. doi:10.1109/tbme.2013.2292320.

37. Zhou, L., Solhjoo, S., Millare, B., Plank, G., Abraham, M. R., Cortassa, S., Trayanova, N., and O’Rourke, B., Effects of regional mitochondrial depolarization on electrical propagation. Circulation: Arrhythmia and Electrophysiology 2014;7:143–151. doi:10.1161/circep.113.000600.

38. Arevalo, H., Plank, G., Helm, P., Halperin, H., and Trayanova, N., Tachycardia in post-infarction hearts: Insights from 3D image-based ventricular models. PLoS ONE 2013;8:e68872. doi:10.1371/journal.pone.0068872.

39. Eriksson, T. S. E., Prassl, A. J., Plank, G., and Holzapfel, G. A., Modeling the dispersion in electromechanically coupled myocardium. International Journal for Numerical Methods in Biomedical Engineering 2013;29:1267–1284. doi:10.1002/cnm.2575.

40. McDowell, K. S., Vadakkumpadan, F., Blake, R., Blauer, J., Plank, G., MacLeod, R. S., and Trayanova, N. A., Mechanistic inquiry into the role of tissue remodeling in fibrotic lesions in human atrial fibrillation. Biophysical Journal 2013;104:2764–2773. doi:10.1016/j.bpj.2013.05.025.

41. Bishop, M. J., Vigmond, E. J., and Plank, G., The functional role of electrophysiological heterogeneity in the rabbit ventricle during rapid pacing and arrhythmias. American Journal of Physiology-Heart and Circulatory Physiology 2013;304:H1240–H1252. doi:10.1152/ajpheart.00894.2012.

42. Augustin, C. M., and Plank, G., Simulating the mechanics of myocardial tissue using strongly scalable parallel algorithms. Biomedical Engineering / Biomedizinische Technik 2013; doi:10.1515/bmt-2013-4322.

43. Campos, F. O., Shiferaw, Y., and Plank, G., Tissue structure and ca2$\mathplus$-mediated ectopic beats. Biomedical Engineering / Biomedizinische Technik 2013; doi:10.1515/bmt-2013-4320.

44. Plank, G., Prassl, A. J., and Augustin, C., Computational challenges in building multi-scale and multi-physics models of cardiac electro-mechanics. Biomedical Engineering / Biomedizinische Technik 2013; doi:10.1515/bmt-2013-4318.

45. McDowell, K. S., Vadakkumpadan, F., Blake, R., Blauer, J., Plank, G., MacLeod, R. S., and Trayanova, N. A., Methodology for patient-specific modeling of atrial fibrosis as a substrate for atrial fibrillation. Journal of Electrocardiology 2012;45:640–645. doi:10.1016/j.jelectrocard.2012.08.005.

46. Binder, J. S., Weidemann, F., Schoser, B., Niemann, M., Machann, W., Beer, M., Plank, G., Schmidt, A., Bisping, E., Poparic, I., Lafer, I., Stojakovic, T., Quasthoff, S., Vincent, J. B., et al., Spongious hypertrophic cardiomyopathy in patients with mutations in the four-and-a-half LIM domain 1 gene. Circulation: Cardiovascular Genetics 2012;5:490–502. doi:10.1161/circgenetics.111.962332.

47. Bishop, M. J., and Plank, G., The role of fine-scale anatomical structure in the dynamics of reentry in computational models of the rabbit ventricles. The Journal of Physiology 2012;590:4515–4535. doi:10.1113/jphysiol.2012.229062.

48. Neic, A., Liebmann, M., Hoetzl, E., Mitchell, L., Vigmond, E. J., Haase, G., and Plank, G., Accelerating cardiac bidomain simulations using graphics processing units. IEEE Transactions on Biomedical Engineering 2012;59:2281–2290. doi:10.1109/tbme.2012.2202661.

49. Niederer, S. A., Lamata, P., Plank, G., Chinchapatnam, P., Ginks, M., Rhode, K., Rinaldi, C. A., Razavi, R., and Smith, N. P., Analyses of the redistribution of work following cardiac resynchronisation therapy in a patient specific model. PLoS ONE 2012;7:e43504. doi:10.1371/journal.pone.0043504.

50. Rantner, L. J., Arevalo, H. J., Constantino, J. L., Efimov, I. R., Plank, G., and Trayanova, N. A., Three-dimensional mechanisms of increased vulnerability to electric shocks in myocardial infarction: Altered virtual electrode polarizations and conduction delay in the peri-infarct zone. The Journal of Physiology 2012;590:4537–4551. doi:10.1113/jphysiol.2012.229088.

51. Bayer, J. D., Blake, R. C., Plank, G., and Trayanova, N. A., A novel rule-based algorithm for assigning myocardial fiber orientation to computational heart models. Annals of Biomedical Engineering 2012;40:2243–2254. doi:10.1007/s10439-012-0593-5.

52. Campos, F. O., Prassl, A. J., Seemann, G., Santos, R. W. dos, Plank, G., and Hofer, E., Influence of ischemic core muscle fibers on surface depolarization potentials in superfused cardiac tissue preparations: A simulation study. Medical & Biological Engineering & Computing 2012;50:461–472. doi:10.1007/s11517-012-0880-1.

53. Bishop, M. J., Vigmond, E., and Plank, G., Cardiac bidomain bath-loading effects during arrhythmias: Interaction with anatomical heterogeneity. Biophysical Journal 2011;101:2871–2881. doi:10.1016/j.bpj.2011.10.052.

54. Niederer, S. A., Kerfoot, E., Benson, A. P., Bernabeu, M. O., Bernus, O., Bradley, C., Cherry, E. M., Clayton, R., Fenton, F. H., Garny, A., Heidenreich, E., Land, S., Maleckar, M., Pathmanathan, P., et al., Verification of cardiac tissue electrophysiology simulators using an n -version benchmark. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 2011;369:4331–4351. doi:10.1098/rsta.2011.0139.

55. Camara, O., Sermesant, M., Lamata, P., Wang, L., Pop, M., Relan, J., Craene, M. D., Delingette, H., Liu, H., Niederer, S., Pashaei, A., Plank, G., Romero, D., Sebastian, R., et al., Inter-model consistency and complementarity: Learning from ex-vivo imaging and electrophysiological data towards an integrated understanding of cardiac physiology. Progress in Biophysics and Molecular Biology 2011;107:122–133. doi:10.1016/j.pbiomolbio.2011.07.007.

56. NIEDERER, S. A., SHETTY, A., PLANK, G., BOSTOCK, J., RAZAVI, R., SMITH, N., and RINALDI, C., Biophysical modeling to simulate the response to multisite left ventricular stimulation using a quadripolar pacing lead. Pacing and Clinical Electrophysiology 2011;35:204–214. doi:10.1111/j.1540-8159.2011.03243.x.

57. Costa, C. M., Campos, F. O., Prassl, A. J., Santos, R. W. dos, Sanchez-Quintana, D., Hofer, E., and Plank, G., A finite element approach for modeling micro-structural discontinuities in the heart. 2011 in 2011 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (IEEE). doi:10.1109/iembs.2011.6090059.

58. Çetingül, H. E., Plank, G., Trayanova, N. A., and Vidal, R., Estimation of local orientations in fibrous structures with applications to the purkinje system. IEEE Transactions on Biomedical Engineering 2011;58:1762–1772. doi:10.1109/tbme.2011.2116119.

59. Rocha, B. M., Kickinger, F., Prassl, A. J., Haase, G., Vigmond, E. J., Santos, R. W. dos, Zaglmayr, S., and Plank, G., A macro finite-element formulation for cardiac electrophysiology simulations using hybrid unstructured grids. IEEE Transactions on Biomedical Engineering 2011;58:1055–1065. doi:10.1109/tbme.2010.2064167.

60. Trayanova, N., Constantino, J., Ashihara, T., and Plank, G., Modeling defibrillation of the heart: Approaches and insights. IEEE Reviews in Biomedical Engineering 2011;4:89–102. doi:10.1109/rbme.2011.2173761.

61. Bishop, M. J., Boyle, P. M., Plank, G., Welsh, D. G., and Vigmond, E. J., Modeling the role of the coronary vasculature during external field stimulation. IEEE Transactions on Biomedical Engineering 2010;57:2335–2345. doi:10.1109/tbme.2010.2051227.

62. Niederer, S. A., Plank, G., Chinchapatnam, P., Ginks, M., Lamata, P., Rhode, K. S., Rinaldi, C. A., Razavi, R., and Smith, N. P., Length-dependent tension in the failing heart and the efficacy of cardiac resynchronization therapy. Cardiovascular Research 2010;89:336–343. doi:10.1093/cvr/cvq318.

63. Vadakkumpadan, F., Arevalo, H., Prassl, A. J., Chen, J., Kickinger, F., Kohl, P., Plank, G., and Trayanova, N., Image-based models of cardiac structure in health and disease. Wiley Interdisciplinary Reviews: Systems Biology and Medicine 2010;2:489–506. doi:10.1002/wsbm.76.

64. Deo, M., Boyle, P., Plank, G., and Vigmond, E., Arrhythmogenic mechanisms of the purkinje system during electric shocks: A modeling study. Heart Rhythm 2009;6:1782–1789. doi:10.1016/j.hrthm.2009.08.023.

65. Boyle, P. M., Deo, M., Plank, G., and Vigmond, E. J., Purkinje-mediated effects in the response of quiescent ventricles to defibrillation shocks. Annals of Biomedical Engineering 2009;38:456–468. doi:10.1007/s10439-009-9829-4.

66. Southern, J., Plank, G., Vigmond, E., and Whiteley, J., Solving the coupled system improves computational efficiency of the bidomain equations. IEEE Transactions on Biomedical Engineering 2009;56:2404–2412. doi:10.1109/tbme.2009.2022548.

67. Plank, G., Burton, R. A., Hales, P., Bishop, M., Mansoori, T., Bernabeu, M. O., Garny, A., Prassl, A. J., Bollensdorff, C., Mason, F., Mahmood, F., Rodriguez, B., Grau, V., Schneider, J. E., et al., Generation of histo-anatomically representative models of the individual heart: Tools and application. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 2009;367:2257–2292. doi:10.1098/rsta.2009.0056.

68. Prassl, A., Kickinger, F., Ahammer, H., Grau, V., Schneider, J., Hofer, E., Vigmond, E., Trayanova, N., and Plank, G., Automatically generated, anatomically accurate meshes for cardiac electrophysiology problems. IEEE Transactions on Biomedical Engineering 2009;56:1318–1330. doi:10.1109/tbme.2009.2014243.

69. Vigmond, E., Vadakkumpadan, F., Gurev, V., Arevalo, H., Deo, M., Plank, G., and Trayanova, N., Towards predictive modelling of the electrophysiology of the heart. Experimental Physiology 2009;94:563–577. doi:10.1113/expphysiol.2008.044073.

70. Vadakkumpadan, F., Rantner, L. J., Tice, B., Boyle, P., Prassl, A. J., Vigmond, E., Plank, G., and Trayanova, N., Image-based models of cardiac structure with applications in arrhythmia and defibrillation studies. Journal of Electrocardiology 2009;42:157.e1–157.e10. doi:10.1016/j.jelectrocard.2008.12.003.

71. Morgan, S. W., Plank, G., Biktasheva, I. V., and Biktashev, V. N., Low energy defibrillation in human cardiac tissue: A simulation study. Biophysical Journal 2009;96:1364–1373. doi:10.1016/j.bpj.2008.11.031.

72. Deo, M., Boyle, P., Plank, G., and Vigmond, E., Role of purkinje system in cardiac arrhythmias. 2008 in 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (IEEE). doi:10.1109/iembs.2008.4649112.

73. Plank, G., Zhou, L., Greenstein, J. L., Cortassa, S., Winslow, R. L., ORourke, B., and Trayanova, N. A., From mitochondrial ion channels to arrhythmias in the heart: Computational techniques to bridge the spatio-temporal scales. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 2008;366:3381–3409. doi:10.1098/rsta.2008.0112.

74. Vigmond, E., Santos, R. W. dos, Prassl, A., Deo, M., and Plank, G., Solvers for the cardiac bidomain equations. Progress in Biophysics and Molecular Biology 2008;96:3–18. doi:10.1016/j.pbiomolbio.2007.07.012.

75. Trayanova, N., and Plank, G., Arrhythmogenesis research: A perspective from computational electrophysiology viewpoint. 2007 in 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (IEEE). doi:10.1109/iembs.2007.4352310.

76. Deo, M., Bauer, S., Plank, G., and Vigmond, E., Reduced-order preconditioning for bidomain simulations. IEEE Transactions on Biomedical Engineering 2007;54:938–942. doi:10.1109/tbme.2006.889203.

77. Plank, G., Liebmann, M., Santos, R. W. dos, Vigmond, E. J., and Haase, G., Algebraic multigrid preconditioner for the cardiac bidomain model. IEEE Transactions on Biomedical Engineering 2007;54:585–596. doi:10.1109/tbme.2006.889181.

78. Burton, R. A., Plank, G., Schneider, J. E., Grau, V., Ahammer, H., Keeling, S. L., Lee, J., Smith, N. P., Gavaghan, D., Trayanova, N., and Kohl, P., Three-dimensional models of individual cardiac histoanatomy: Tools and challenges. Annals of the New York Academy of Sciences 2006;1080:301–319. doi:10.1196/annals.1380.023.

79. Trayanova, N., Plank, G., and Rodríguez, B., What have we learned from mathematical models of defibrillation and postshock arrhythmogenesis? Application of bidomain simulations. Heart Rhythm 2006;3:1232–1235. doi:10.1016/j.hrthm.2006.04.015.

80. Deo, M., Bauer, S., Plank, G., and Vigmond, E., Accelerating large cardiac bidomain simulations by arnoldi preconditioning. 2006 in 2006 International Conference of the IEEE Engineering in Medicine and Biology Society (IEEE). doi:10.1109/iembs.2006.259271.

81. Plank, G., Leon, L. J., Kimber, S., and Vigmond, E. J., Defibrillation depends on conductivity fluctuations and the degree of disorganization in reentry patterns. Journal of Cardiovascular Electrophysiology 2005;16:205–216. doi:10.1046/j.1540-8167.2005.40140.x.

82. WeberdosSantos, R., Plank, G., Bauer, S., and Vigmond, E., Parallel multigrid preconditioner for the cardiac bidomain model. IEEE Transactions on Biomedical Engineering 2004;51:1960–1968. doi:10.1109/tbme.2004.834275.

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